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Dave Warshaw David M. Warshaw, Ph.D.
Professor and Chair of Molecular Physiology & Biophysics

Our research interests focus on the structure and function of the contractile proteins associated with muscle contraction. Specifically, how the myosin molecular motor interacts with actin to convert the energy from ATP hydrolysis into mechanical work. We take a comparative approach by using the various muscle types in both normal and disease states as model systems for providing myosin motors that differ substantially in both their structure and functional capacities.  


Ned Debold, Ph.D.Ned Debold
Post-doctoral Associate

The mechanism through which muscle is able to produce force and generate movement is a physiological phenomenon still poorly understood at a molecular level. While it is generally accepted that the mechanical events of muscle myosin are powered by the chemical energy derived from ATP, the nature of coupling between the structural changes in myosin with the steps of ATP hydrolysis is less clear. I employ a two-pronged approach in an effort to more fully understand this process. One approach takes advantage of mutations in cardiac myosin, present in cardiomyopathies, to determine the effect of specific amino acid substitutions on myosin’s ability to produce force and generate motion. These properties are quantified using the in vitro motility assay, and unitary measures of myosin’s displacement and dwell time using the three bead laser-trap assay. In another approach I examine the effects of altering the level of free energy available from ATP hydrolysis on myosin’s ability to translocate actin at both the ensemble and single molecule level. Through these projects I hope to both enhance our understanding of muscular contraction and elucidate the molecular changes which cause compromised cardiac function observed in diseases such as genetically linked cardiomyopathies.


Md. Yusuf Ali, Ph.D.
Post-doctoral Associate

Myosin, a motor protein, captures the energy from ATP hydrolysis to generate force and motion through its interactions with actin filaments in both muscle and non-muscle cells. However, it remains unclear how myosin converts chemical energy into mechanical movement. To address this question, I am studying a two-headed, processive myosin V molecular motor that moves along an actin filament over long distances. To understand the mechanism of force generation at a single molecule level, I am using quantum dots which are bound to each of the two heads of myosin V through a biotin-streptavidin linkage. I observe the movement of myosin V at different conditions using a TIRF microscope that provides both high spatial and time resolution. I am mainly interested in characterizing myosin V’s walking mechanism and conformational changes during its movement along an actin filament. Myosin V is implicated in organelle transport in neurons and must move within a dense intracellular cytoskeletal network that is composed of overlapping and crisscrossing actin, intermediate, and microtubular filaments. The microtubule network is believed to be used for long-range cargo transport through kinesins and dyneins while the actin filaments are used for short range transport through myosin motors. But the mechanism by which this transport is coordinated is still unclear and is the present focus of my research.


Sam Walcott, Ph.D.
Post-doctoral Associate

 

Smooth Muscle Myosin Head-Head Communication

 


Shane Nelson, Ph.D.
Post-doctoral Associate

Myosin V Vesicle Transport in COS-7 cells

 

 


Chong Zhang
Graduate Student

Myosin V is a molecular motor that converts the energy from ATP hydrolysis to long distance movement along actin filament. It moves processively in a “hand over hand” fashion and transport organelles in the cytoskeleton network. This processivity requires the coordination between the two heads which is believed to be strain-dependent. My current study is to use a combination of TIRF and laser trap technique to study the load dependent stepping behavior of myosin V and the coordination between the two heads.


 

Abbey Weith
Graduate Student

Actin is a key filamentous cytoskeletal protein involved in many processes, including muscle contraction, cellular motility, and vesicle trafficking. One of an actin filament’s fundamental properties is its flexural rigidity, or the stiffness with which it bends. In my research I digitize images of actin moving under Brownian motion, and then use a computer program to find the flexural rigidity through Fourier transforms. Once this technique is reliable, the method will be applied to several actin mutations that cause heart failure to see if the mutants have a different flexural rigidity than wild-type actin.

 


Samantha Beck
Laboratory Technician

I am involved in a project that investigates the effects of single point mutations in human skeletal and cardiac muscle myosin found in patients with familial hypertrophic cardiomyopathy (FHC). In order to study the effects of these mutations, we purify myosin from human muscle biopsies and use in vitro motility assays to measure actin velocity. The actin velocities of the mutant myosins allow us to compare their mechanics and biochemistry to that of normal myosin, which may lead us to a better knowledge of FHC.


Guy KennedyGuy Kennedy
Research Project Engineer

My goal is to provide the tools for our lab to do world class research in molecular physiology. Molecular reactions require measurement of nanometer displacement, pico-newton force, and single molecule fluorescence. Microscopy based instrumentation using recent techniques in TIRFM, Laser Tweezers, Confocal detection, and Photon counting are my focus. I am currently testing new instrumentation allowing us to make real time measurements of ATP hydrolysis during the actin-myosin interaction. In progress projects include single molecule 3D fluorescence polarization measurements, and other initiatives in nano-technology.

 

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